MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Staphylococcus saprophyticus
19428wB1_WM06
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 40
bases: 2,926,943 bps
CDS: 2,726
rRNA: 9
Repeat region:
tmRNA: 1
tRNA: 59
misc RNA:
Total features: 2,795
Total number of protein coding genes annotated/found:
2,726
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Items 21 - 40
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Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range
Gene Product Name
SEQF5041|JADGLJ010000010.1
SEQF5041_00003
Genome Viewer
NA
AA
552/184
2250-2801
PTS system glucitol/sorbitol-specific EIIC component
SEQF5041|JADGLJ010000003.1
SEQF5041_01244
Genome Viewer
NA
AA
471/157
2284-1814
hypothetical protein
SEQF5041|JADGLJ010000008.1
SEQF5041_02563
Genome Viewer
NA
AA
1269/423
2297-1029
L-threonine dehydratase biosynthetic IlvA
SEQF5041|JADGLJ010000001.1
SEQF5041_00133
Genome Viewer
NA
AA
459/153
2314-1856
Multidrug resistance efflux pump SepA
SEQF5041|JADGLJ010000009.1
SEQF5041_02698
Genome Viewer
NA
AA
807/269
2344-3150
Cyclic di-AMP synthase CdaA
SEQF5041|JADGLJ010000013.1
SEQF5041_00120
Genome Viewer
NA
AA
1332/444
2358-1027
Multidrug export protein MepA
SEQF5041|JADGLJ010000013.1
SEQF5041_00121
Genome Viewer
NA
AA
591/197
2567-3157
hypothetical protein
SEQF5041|JADGLJ010000005.1
SEQF5041_01959
Genome Viewer
NA
AA
840/280
2654-1815
DegV domain-containing protein
SEQF5041|JADGLJ010000010.1
SEQF5041_00004
Genome Viewer
NA
AA
1014/338
2812-3825
PTS system glucitol/sorbitol-specific EIIB component
SEQF5041|JADGLJ010000004.1
SEQF5041_01623
Genome Viewer
NA
AA
1239/413
2893-1655
Modification methylase BanI
SEQF5041|JADGLJ010000008.1
SEQF5041_02564
Genome Viewer
NA
AA
576/192
2910-2335
3-isopropylmalate dehydratase small subunit
SEQF5041|JADGLJ010000011.1
SEQF5041_00061
Genome Viewer
NA
AA
1488/496
3041-1554
Lysine--tRNA ligase
SEQF5041|JADGLJ010000005.1
SEQF5041_01960
Genome Viewer
NA
AA
486/162
3149-2664
Dihydrofolate reductase
SEQF5041|JADGLJ010000009.1
SEQF5041_02699
Genome Viewer
NA
AA
933/311
3152-4084
CdaA regulatory protein CdaR
SEQF5041|JADGLJ010000013.1
SEQF5041_00122
Genome Viewer
NA
AA
1077/359
3520-4596
hypothetical protein
SEQF5041|JADGLJ010000011.1
SEQF5041_00062
Genome Viewer
NA
AA
480/160
3543-3064
Bifunctional folate synthesis protein
SEQF5041|JADGLJ010000006.1
SEQF5041_02276
Genome Viewer
NA
AA
1200/400
3561-2362
Acetate kinase
SEQF5041|JADGLJ010000003.1
SEQF5041_01245
Genome Viewer
NA
AA
1302/434
3607-2306
Polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagU
SEQF5041|JADGLJ010000001.1
SEQF5041_00134
Genome Viewer
NA
AA
1341/447
3812-2472
Multidrug efflux pump SdrM
SEQF5041|JADGLJ010000010.1
SEQF5041_00005
Genome Viewer
NA
AA
351/117
3843-4193
PTS system glucitol/sorbitol-specific EIIA component
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Items 21 - 40
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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